Protein ZmHB130
ZmHB130 is a protein in the Homeobox family.
Information
TF Name: ZmHB130
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB130
Uniprot ID: A0A1D6PDQ1

Protein ZmHB130

ZmHB130 is a protein in the Homeobox family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00046WUS-HB
Zm00001eb015500_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d028986DAPseq no logo sequence fimo position
Zm00001d028986DAPseq no logo sequence fimo position
Zm00001d028986ChIPseq no logo sequence fimo position
Zm00001d028986PChIPseq no logo sequence fimo position

Interactions where ZmHB130 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB130 is the target  
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There are 75 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb015500_T001 from maize genome v5

Amino Acid Sequence
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MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00046
WUS-HB
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Nucleotide Sequence
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CAACAAAGGCATGAGTGTGCAAGCG...

GRMZM2G314064_T01 from maize genome v3


Related TFome: pUT6718

Amino Acid Sequence
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MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVARPT

Nucleotide Sequence
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TGCAAGCGTGGCTGTCTCCTAAACC...

Zm00001d028986_T001 from maize genome v4

Amino Acid Sequence
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MEGGSNSPDGQSSGGSPEERGSGGSGGRGTGEPARSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDA
NVFYWFQNRRSRSRRRQRQMQAAAAAAAAAAASSASNNSSPAASATVGLPSGALQYPLAMGGTAACQYEQQASSSSSSGS
TGGSSLGLFALGAAGVPGTGGGGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHH
QQYYSCESPAATITVFINGVPMEVPRGPIDLRAMFGQDVMLVHSTGVILPVNDYGILTQTLQLGESYFLVIISHITCLLR
SKS

Nucleotide Sequence
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GTGCAAGCGTGGCTGTCTCCTAAAC...

Zm00001d028986_T002 from maize genome v4

Amino Acid Sequence
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MKQFSKCNMSLGLNINTHVLNIICIRLLKLTTFSFLPFGLLNPPSMRPCMDLKLLSSTIQPCI

Nucleotide Sequence
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ATGCTTTATTTTGGGTCTTCCTTTC...

Zm00001d028986_T004 from maize genome v4

Amino Acid Sequence
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MEGGSNSPDGQSSGGSPEERGSGGSGGLPSGALQYPLAMGGTAACQYEQQASSSSSSGSTGGSSLGLFALGAAGVPGTGG
GGYFQASCGASSPLATGLMGDVDSSGGSDDLFAISRQMGFAAASTVASASVAPSSNAHHQQYYSCESPAGEYTLPNTNLA

Nucleotide Sequence
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GTGTGCAAGCGTGGCTGTCTCCTAA...


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